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ABOUT THIS RECORD
ID:
MNEST045956
species:
Raphanus raphanistrum subsp raphanistrum
miRNA family:
MIR168
source:
microPC, original name:
miR168
SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGGTCGGGAC
miRNA*
TCCCGCCTTGCATCAACTGA
mismatches:
2
bulges:
1
View larger
pre-miRNA
TCGCTTGGTGCAGGTCGGGAC
TAATTCGCTGACACAGCCACGTGGCTCTTTTTCTTATTGGTTTGTGAGCAGGGATTGGA
TCCCGCCTTGCATCAACTGA
dot-bracket secondary structure
(((.((((((((((.((((((
((((((.(((.((((((((...((........))...))).)))))..)))))))))).
))))).)))))))))).)))
SIMILARITIES
miRBase
ath-MIR168a
:
1e-21
PMRD
ath-miRf10239-akr
:
1e-21
microPC
miR168
:
5e-52
UniProt
no hits
RFAM
MIR168: 3e-32
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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