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ABOUT THIS RECORD
ID:
MNEST046005
species:
Vigna unguiculata
source:
microPC, original name:
miR399
Taxonomy by NCBI:
Vigna unguiculata
Vigna
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGAGTTGCCC
miRNA*
GCTTCTCTTTGTTGGCAGG
mismatches:
4
bulges:
0
View larger
pre-miRNA
GG
GCTTCTCTTTGTTGGCAGG
AAATGACATGATCATCTCATGAAATATCT
TGCCAAAGGAGAGTTGCCC
dot-bracket secondary structure
((
((..(((((..((((((((
(.((..(((((.....)))))..)).)))
))))))..)))))..))))
SIMILARITIES
miRBase
pvu-MIR399a
:
2e-26
PMRD
pvu-miR399a
:
2e-26
microPC
miR399
:
1e-33
UniProt
no hits
RFAM
mir-399: 0.0000009
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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