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ABOUT THIS RECORD

ID: MNEST046010
species: Ipomoea nil
source: microPC, original name: miR319

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGACTGAAGGGAGCTCCC

miRNA*
 GAGCTTTCTTCAGTCCAAAC

mismatches: 4
bulges: 0
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pre-miRNA
 GAGAGCTTTCTTCAGTCCAAACATGGGTGGCAGTAGGATTCAATTAGCTTCCGACTCATTCATCCAAATGCTGAGATGAGATGACGATGAACCCGGCCTT
GATGACTAATGAACACTGTCTCAGTAACTGAGTGAATGATGCGGGAGACAAGTTGGATCTTAAGCTTCCTGTACTTGGACTGAAGGGAGCTCCC

dot-bracket secondary structure
..(((((..(((((((((((..(((((.(((..((((((((((((.(((((((..(((((((..((..(((((((((.((....((.......))...((
.((.....)).))..)))))))))))..))..)))))))..)))))).).)))))))))))).))).)))))..)))))))))))..)))))..


SIMILARITIES
miRBase rco-MIR319a: 2e-28

PMRD ptc-miR319a: 5e-26

microPC miR319: 9e-108		UniProt no hits

RFAM MIR159: 4e-27

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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