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ABOUT THIS RECORD
ID:
MNEST046024
species:
Brassica napus
source:
microPC, original name:
miR160
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCCTGGCTCCCTGTATGCCA
miRNA*
GCGTACAGAGTAGTCAAGC
mismatches:
2
bulges:
1
View larger
pre-miRNA
GCCTGGCTCCCTGTATGCCA
CAAGTAAATACCGATCTCATTATGAAATCGGACACTAGTG
GCGTACAGAGTAGTCAAGC
dot-bracket secondary structure
((.(((((.(((((((((((
(.(((.....(((((.((.....)).)))))..))).)))
)))))))).).))))).))
SIMILARITIES
miRBase
aly-MIR160b
:
0.000000000000001
PMRD
ath-miRf10238-akr
:
0.0000000000002
microPC
miR160
:
1e-39
UniProt
no hits
RFAM
mir-160: 2e-38
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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