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ABOUT THIS RECORD
ID:
MNEST046030
species:
Pinus taeda
miRNA family:
MIR1313
source:
microPC, original name:
miR1313
Taxonomy by NCBI:
Pinus taeda
Pinus
Pinus
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACCACTGAAATTATTGTTCG
miRNA*
AACAATAATTTCAGTGGAA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TACCACTGAAATTATTGTTCG
AAATAACACCTGCAATTCATGGATGTATACTGCCGTGGTATCGCCAGTCTAACCTAGTTGCAGGGTTGCAACACATGGC
ATGGTGGGGGATCTATTGGGCAATAACCAAGTTGCATGGGTGTATTTATCC
AACAATAATTTCAGTGGAA
dot-bracket secondary structure
..(((((((((((((((((..
(((((.(((((((((((..(((.(((....((((((((.(((.((..((...((..(((((......)))))....)).
..))..)).)))))))..))))))).)))))))))..))))))))))....
)))))))))))))))))..
SIMILARITIES
miRBase
pta-MIR1313
:
2e-65
PMRD
pta-miR1313
:
2e-65
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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