ABOUT THIS RECORDspecies: Brachypodium distachyon
source: microPC, original name: miR1132
Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTATGGATCGGAGGGAG miRNA* CCCTCCGATCCATAGTAA mismatches: 1 bulges: 0 |
pre-miRNA
TTCCCTCCGATCCATAGTAAGTGACACTTATTATGGATCGGAGGGAG
dot-bracket secondary structure
.((((((((((((((((((((.....)))))))))))))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TTCCCTCCGATCCATAGTAAGTGACACTTATTATGGATCGGAGGGAG
dot-bracket secondary structure
.((((((((((((((((((((.....)))))))))))))))))))).
SIMILARITIES| miRBase bdi-MIR5181b: 0.00003 PMRD no hits microPC no hits | UniProt no hits RFAM MIR1122: 0.000002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
