ABOUT THIS RECORDspecies: Vigna unguiculata
source: microPC, original name: miR156
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGAAGATAGAGAGCACA miRNA* TGCTCTCTATTCTTCTG mismatches: 0 bulges: 1 |
pre-miRNA
CAGAAGATAGAGAGCACAGATGATGAAATGCATGAAAGGAAATTGCATCTCGCTCCTTTGTGCTCTCTATTCTTCTG
dot-bracket secondary structure
((((((((((((((((((((.(((((.(((((...........))))).))).)).))))))))))))).)))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
CAGAAGATAGAGAGCACAGATGATGAAATGCATGAAAGGAAATTGCATCTCGCTCCTTTGTGCTCTCTATTCTTCTG
dot-bracket secondary structure
((((((((((((((((((((.(((((.(((((...........))))).))).)).))))))))))))).)))))))
SIMILARITIES| miRBase gma-MIR156e: 2e-26 PMRD gma-miR157c: 2e-26 microPC miR157: 2e-38 | UniProt no hits RFAM no hits |
Identical with: miR157 from microPC (MNEST045761) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
