ABOUT THIS RECORDspecies: Vigna unguiculata
source: microPC, original name: miR169
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCCAAGGATGACTTGCCG miRNA* GCAAGTGGTTCTTGGCT mismatches: 1 bulges: 0 |
pre-miRNA
AGCCAAGGATGACTTGCCGGCGTTATGCTGCATGATGCTTTTTACGGCGACTTTGCCGGCAAGTGGTTCTTGGCT
dot-bracket secondary structure
((((((((((.(((((((((((...(((((...((....))...)))))....))))))))))).))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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AGCCAAGGATGACTTGCCGGCGTTATGCTGCATGATGCTTTTTACGGCGACTTTGCCGGCAAGTGGTTCTTGGCT
dot-bracket secondary structure
((((((((((.(((((((((((...(((((...((....))...)))))....))))))))))).))))))))))
SIMILARITIES| miRBase gma-MIR169a: 0.00000005 PMRD gma-miR169a: 0.00000005 microPC miR169: 3e-37 | UniProt no hits RFAM MIR169_2: 0.00002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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