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ABOUT THIS RECORD

ID: MNEST046061
species: Populus tremula x Populus tremuloides
miRNA family: MIR396
source: microPC, original name: miR396

Taxonomy by NCBI:
Populus tremula x Populus tremuloides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACAGCTTTCTTGAACT

miRNA*
 TTCATGGAGAGCTTCGAAGC

mismatches: 4
bulges: 2
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pre-miRNA
 TTCATGGAGAGCTTCGAAGCTTCGAAATATATTTTTTGGCGTGTTTGTATGTGACCCTCTTTGTATTCTTCCACAGCTTTCTTGAACT

dot-bracket secondary structure
((((.((((((((..((((......((((((......((((..(....)..)).)).....))))))))))...))))))))))))..


SIMILARITIES
miRBase tcc-MIR396b: 0.000000000001

PMRD lja-miR396: 0.000000000004

microPC miR396: 7e-45		UniProt no hits

RFAM MIR396: 0.000000005

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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