miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST046063
species:
Eucalyptus globulus
source:
microPC, original name:
miR399
Taxonomy by NCBI:
Eucalyptus globulus
Eucalyptus
Myrtaceae
Myrtales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGAGTTGCCC
miRNA*
GCTTCTCTACTTTGGCAAC
mismatches:
3
bulges:
0
View larger
pre-miRNA
GG
GCTTCTCTACTTTGGCAAC
ACATGTCAATGATGACGACGACGGAGAAGTCGAACGGATGCCGTCCAGTCATCGACGACT
TGCCAAAGGAGAGTTGCCC
dot-bracket secondary structure
((
((..((((.(((((((((.
....(((..(((((((...(((((....(((.....))).)))))..)))))))..))))
)))))))).))))..))))
SIMILARITIES
miRBase
vvi-MIR399b
:
0.000005
PMRD
vvi-miR399b
:
0.000005
microPC
miR399
:
5e-52
UniProt
no hits
RFAM
mir-399: 0.0003
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record