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ABOUT THIS RECORD

ID: MNEST046063
species: Eucalyptus globulus
source: microPC, original name: miR399

Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGAGTTGCCC

miRNA*
GCTTCTCTACTTTGGCAAC

mismatches: 3
bulges: 0

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pre-miRNA
GGGCTTCTCTACTTTGGCAACACATGTCAATGATGACGACGACGGAGAAGTCGAACGGATGCCGTCCAGTCATCGACGACTTGCCAAAGGAGAGTTGCCC


dot-bracket secondary structure
((((..((((.(((((((((.....(((..(((((((...(((((....(((.....))).)))))..)))))))..)))))))))))).))))..))))



SIMILARITIES
miRBase vvi-MIR399b: 0.000005

PMRD vvi-miR399b: 0.000005

microPC miR399: 5e-52
UniProt no hits

RFAM mir-399: 0.0003

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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