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ABOUT THIS RECORD
ID:
MNEST046078
species:
Cucumis melo subsp. melo
source:
microPC, original name:
miR167
Taxonomy by NCBI:
Cucumis melo subsp. melo
Cucumis melo
Cucumis
Cucurbitaceae
Cucurbitales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTAA
miRNA*
AGATCATATGGTAGCTTCA
mismatches:
4
bulges:
1
View larger
pre-miRNA
TGAAGCTGCCAGCATGATCTAA
ACTTCTTCTTGCTCTTCACTCAAGCCAAGGAAAGATC
AGATCATATGGTAGCTTCA
dot-bracket secondary structure
.((((((((((..(((((((..
.(((.((((((((.........)).)))))))))...
))))))).)))))))))).
SIMILARITIES
miRBase
tcc-MIR167a
:
0.00000001
PMRD
vvi-miR167e
:
0.00000006
microPC
miR167
:
5e-39
UniProt
no hits
RFAM
MIR167_1: 0.0000003
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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