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ABOUT THIS RECORD

ID: MNEST046087
species: Cichorium intybus
source: microPC, original name: miR396

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACGGCTTTCTTGAAC

miRNA*
 TCAATAAAGCTGTGGGA

mismatches: 1
bulges: 0
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pre-miRNA
 TTCCACGGCTTTCTTGAACTGCATGGGCTTTGATCTATCAGATCTTTGTTTTTATATATAATCTTTGCGGTTCAATAAAGCTGTGGGA

dot-bracket secondary structure
((((((((((((.((((((((((.((((...((((.....))))...))))..............)))))))))).))))))))))))


SIMILARITIES
miRBase aqc-MIR396a: 0.00000007

PMRD aqc-miR396a: 0.00000007

microPC miR396: 7e-45		UniProt no hits

RFAM MIR396: 0.000005

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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