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ABOUT THIS RECORD
ID:
MNEST046096
species:
Vigna unguiculata
miRNA family:
MIR162
source:
microPC, original name:
miR162
Taxonomy by NCBI:
Vigna unguiculata
Vigna
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCAG
miRNA*
GGAGGCAGCGGTTCATCGATC
mismatches:
3
bulges:
0
View larger
pre-miRNA
CT
GGAGGCAGCGGTTCATCGATC
TCTTCCTGAATTTGGCTGTGGAAGAACACAAAGCAAGAATCGG
TCGATAAACCTCTGCATCCAG
dot-bracket secondary structure
((
(((.((((.((((.(((((((
..(((.((........((((......))))...)).)))..))
))))).)))).)))).)))))
SIMILARITIES
miRBase
cpa-MIR162a
:
2e-17
PMRD
cpa-miR162a
:
2e-17
microPC
miR162
:
4e-43
UniProt
no hits
RFAM
MIR162_2: 3e-16
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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