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ABOUT THIS RECORD
ID:
MNEST046098
species:
Ipomoea nil
source:
microPC, original name:
miR168
Taxonomy by NCBI:
Ipomoea nil
Ipomoea
Ipomoeeae
Convolvulaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGGTCGGGA
miRNA*
CCGCCTTGCATCAACTGA
mismatches:
2
bulges:
0
View larger
pre-miRNA
TCGCTTGGTGCAGGTCGGGA
ACTATCGCCGCGCCGGCGGCTGAGCGAGCACGGTTGCGTCGTCGTCTCCGGCGAATTTAGCTC
CCGCCTTGCATCAACTG
A
dot-bracket secondary structure
(((.((((((((((.(((((
.(((......((((((.(((.((.((((((....))).)))))))).))))))....))).))
))).)))))))))).))
)
SIMILARITIES
miRBase
ptc-MIR168b
:
0.000005
PMRD
rco-miR168
:
0.000005
microPC
miR168
:
1e-52
UniProt
no hits
RFAM
MIR168: 0.00002
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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