ABOUT THIS RECORDspecies: Eucalyptus globulus
source: microPC, original name: miR167
Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCGTGATCT miRNA* ATCATGTGGCAGCTTCA mismatches: 1 bulges: 1 |
pre-miRNA
TGAAGCTGCCAGCGTGATCTCAACTTTTCTGGTCTCTTAAAGGAAAGATCAGATCATGTGGCAGCTTCA
dot-bracket secondary structure
.((((((((((.((((((((...(((((((..........)))))))...)))))))))))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGAAGCTGCCAGCGTGATCTCAACTTTTCTGGTCTCTTAAAGGAAAGATCAGATCATGTGGCAGCTTCA
dot-bracket secondary structure
.((((((((((.((((((((...(((((((..........)))))))...)))))))))))))))))).
SIMILARITIES| miRBase sly-MIR167: 0.0000002 PMRD sly-miR167: 0.0000002 microPC miR167: 1e-33 | UniProt no hits RFAM MIR167_1: 0.000003 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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