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ABOUT THIS RECORD
ID:
MNEST046122
species:
Populus nigra
source:
microPC, original name:
miR159
Taxonomy by NCBI:
Populus nigra
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCT
miRNA*
AGCTCCTTGAAGTCCAATAG
mismatches:
3
bulges:
0
View larger
pre-miRNA
GG
AGCTCCTTGAAGTCCAATAG
AAGCTCCTGCTGGGTAGATCGAGCTGCTGAGCTATGAATCCCACAGCCCTATCACCATCAGTCATTTTGATGGGCCTG
CGGCTTGCATATCTCAGGAGCTTTATTACCTAATGTTAGATCTTTT
TTTGGATTGAAGGGAGCTCT
dot-bracket secondary structure
((
((((((((..(((((((.((
(((.((..(((((((((...(((((.(((((.((((....((.(((.(((((((.............))))))).)))
.))....)))).))))).)))))..)))))))..))..)).)))))
.)))))))..))))))))))
SIMILARITIES
miRBase
ptc-MIR159b
:
1e-78
PMRD
ptc-miR159b
:
1e-78
microPC
miR159
:
1e-78
UniProt
no hits
RFAM
MIR159: 9e-77
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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