miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST046142
species: Glycine max
miRNA family: MIR1509
source: microPC, original name: miR1509

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTAATCAAGGAAATCACGGTCG

miRNA*
ACCGTGTTTCCTTGGTTAA

mismatches: 1
bulges: 1

View larger
pre-miRNA
TTAATCAAGGAAATCACGGTCGCGTGTGTGCCGGAAAGAAAGTGGCCTGTGATCTCCGGTTTCTCTTTCTCGACCGTGTTTCCTTGGTTAA

dot-bracket secondary structure
.((((((((((((.((((((((.(.(.(.((((((.....((....))......))))))..).)...).)))))))))))))))))))).


SIMILARITIES
miRBase gso-MIR1509a: 1e-46

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

Identical with: gso-MIR1509a from miRBase (MNEST040638)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
download this record
deep sequencing data evidence





Liczniki na strone;