ABOUT THIS RECORDspecies: Phaseolus vulgaris
source: microPC, original name: miR167
Taxonomy by NCBI:
Phaseolus vulgaris Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGCTGCCAGCATGATCT miRNA* ATCATGTGGCTGCTT mismatches: 1 bulges: 1 |
pre-miRNA
AAGCTGCCAGCATGATCTGAGTTTACCTTCTATAATGGTAAAAACAGATCATGTGGCTGCTT
dot-bracket secondary structure
((((.((((.(((((((((..((((((.........))))))..))))))))))))).))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
AAGCTGCCAGCATGATCTGAGTTTACCTTCTATAATGGTAAAAACAGATCATGTGGCTGCTT
dot-bracket secondary structure
((((.((((.(((((((((..((((((.........))))))..))))))))))))).))))
SIMILARITIES| miRBase gso-MIR167a: 1e-20 PMRD gma-miR167n: 1e-20 microPC miR167: 1e-29 | UniProt no hits RFAM MIR167_1: 0.0007 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
