ABOUT THIS RECORDspecies: Picea glauca
source: microPC, original name: miR482
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTCCCTACTCCTCCCATT miRNA* TGGAAGGATAGGGTAAGACT mismatches: 1 bulges: 2 |
pre-miRNA
AGTGGAAGGATAGGGTAAGACTGCGGTTAAGTGAGGCTGCTTCAATAATTATTTGCTCTAATCTCACCAGTCTTCCCTACTCCTCCCATT
dot-bracket secondary structure
(((((.(((((((((.(((((((.......(((((..((...(((.......)))...))..))))))))))))))))).)))).)))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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AGTGGAAGGATAGGGTAAGACTGCGGTTAAGTGAGGCTGCTTCAATAATTATTTGCTCTAATCTCACCAGTCTTCCCTACTCCTCCCATT
dot-bracket secondary structure
(((((.(((((((((.(((((((.......(((((..((...(((.......)))...))..))))))))))))))))).)))).)))))
SIMILARITIES| miRBase pab-MIR482a: 3e-41 PMRD pta-miR482c: 0.000001 microPC miR482: 4e-46 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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