ABOUT THIS RECORDspecies: Citrus sinensis
source: microPC, original name: miR169
Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCCAAGAATGACTTGCCG miRNA* GCAGGCCATTCTTGTCT mismatches: 2 bulges: 0 |
pre-miRNA
AGCCAAGAATGACTTGCCGACGGCATTGACCATAATATCATACGGCAGGCCATTCTTGTCT
dot-bracket secondary structure
((.((((((((.(((((((..(..((((....))))..)...))))))).)))))))).))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
AGCCAAGAATGACTTGCCGACGGCATTGACCATAATATCATACGGCAGGCCATTCTTGTCT
dot-bracket secondary structure
((.((((((((.(((((((..(..((((....))))..)...))))))).)))))))).))
SIMILARITIES| miRBase csi-MIR169: 5e-29 PMRD ptc-miR169t: 0.0006 microPC miR169: 5e-29 | UniProt no hits RFAM MIR169_2: 0.0007 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
