ABOUT THIS RECORDspecies: Taraxacum officinale
source: microPC, original name: miR156
Taxonomy by NCBI:
Taraxacum officinale Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGTGAGCA miRNA* CTCACTTCTCTTGCTGTCA mismatches: 1 bulges: 2 |
pre-miRNA
TGACAGAAGAGAGTGAGCATATGCAAGCAATTGTATAGAGAGATATGCTCTTGTTGTAATTATGATGCGTGTGCTCACTTCTCTTGCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((((((((((((..(((((......)))))..)))))..........))))))))))))).)))))).))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGACAGAAGAGAGTGAGCATATGCAAGCAATTGTATAGAGAGATATGCTCTTGTTGTAATTATGATGCGTGTGCTCACTTCTCTTGCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((((((((((((..(((((......)))))..)))))..........))))))))))))).)))))).))))).
SIMILARITIES| miRBase vvi-MIR156d: 0.000001 PMRD vvi-miR156d: 0.000001 microPC miR156: 5e-46 | UniProt no hits RFAM mir-156: 0.00002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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