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ABOUT THIS RECORD
ID:
MNEST046185
species:
Saccharum officinarum
source:
microPC, original name:
miR444
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTCTCAAGCTTGCTGCC
miRNA*
TGACAAGCTAGAGGCAGC
mismatches:
3
bulges:
0
View larger
pre-miRNA
GG
TGACAAGCTAGAGGCAGC
AACTGCATATCTTGCAAGAAAATTGGTTTTCGAACCATACCGATAATTTTCTTGCAAGTTGTGCAGTTGC
TGTCTCAAGC
TTGCTGCC
dot-bracket secondary structure
((
(..((((((.((((((((
(((((((((.(((((((((((((((....(((........)))))))))))))))))).)))))))))))
)))))).)))
)))..)))
SIMILARITIES
miRBase
ssp-MIR444c
:
2e-54
PMRD
pvi-miR444
:
8e-45
microPC
miR444
:
2e-55
UniProt
no hits
RFAM
MIR444: 1e-50
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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