miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST046202
species:
Gossypium hirsutum
source:
microPC, original name:
miR827
Taxonomy by NCBI:
Gossypium hirsutum
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTAGATGACCATCAACAAAC
miRNA*
TTGTTTATGGTCATCTAAGC
mismatches:
1
bulges:
0
View larger
pre-miRNA
GT
TTGTTTATGGTCATCTAAGC
CATTTTTCATCTCGCCAATTCTTTGTTCAAGCAGTTTTTGGATAATCGAACCGATAGAATACACCCGCAGAAATGATG
T
TTAGATGACCATCAACAAAC
dot-bracket secondary structure
((
(((((.((((((((((((((
((((((((......((((....((((....))))...))))...((((...))))...........).)))))))..)
)
)))))))))))).)))))))
SIMILARITIES
miRBase
ghr-MIR827b
:
2e-64
PMRD
ath-miR827
:
0.00002
microPC
miR827
:
2e-64
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record