ABOUT THIS RECORDspecies: Eucalyptus gunnii
source: microPC, original name: miR398
Taxonomy by NCBI:
Eucalyptus gunnii Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGTTTTCAGGTCACCCCT miRNA* GGGTGATCTTGGTAACACAGG mismatches: 3 bulges: 1 |
pre-miRNA
ATGGGTGATCTTGGTAACACAGGCGCTGTTCCTTTGCGTGTATTCGTATTTGTCCATATGATTCGTGCTATTACATCAGCGCCTGTGTTTTCAGGTCACC
CCT
dot-bracket secondary structure
..(((((((((.((.(((((((((((((.......(((((...((((((......))))))..)))))........))))))))))))).))))))))))
)..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
ATGGGTGATCTTGGTAACACAGGCGCTGTTCCTTTGCGTGTATTCGTATTTGTCCATATGATTCGTGCTATTACATCAGCGCCTGTGTTTTCAGGTCACC
CCT
dot-bracket secondary structure
..(((((((((.((.(((((((((((((.......(((((...((((((......))))))..)))))........))))))))))))).))))))))))
)..
SIMILARITIES| miRBase no hits PMRD no hits microPC miR398: 9e-54 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
