ABOUT THIS RECORDspecies: Glycine max
source: microPC, original name: miR395
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGAAGTGTTTGGGGGAACTC miRNA* GTTCCTCTGAACGCTTCATGT mismatches: 2 bulges: 0 |
pre-miRNA
GAGTTCCTCTGAACGCTTCATGTGATTGGCTAGTTATAGGCCTTTGATGAAGTGTTTGGGGGAACTC
dot-bracket secondary structure
(((((((((..((((((((((.(((..((((.......)))).)))))))))))))..)))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
download this record
GAGTTCCTCTGAACGCTTCATGTGATTGGCTAGTTATAGGCCTTTGATGAAGTGTTTGGGGGAACTC
dot-bracket secondary structure
(((((((((..((((((((((.(((..((((.......)))).)))))))))))))..)))))))))
SIMILARITIES| miRBase mtr-MIR395o: 0.000003 PMRD gma-miR395: 2e-32 microPC miR395: 2e-32 | UniProt no hits RFAM mir-395: 0.00005 |
Identical with: gma-miR395 from PMRD (MNEST048577) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
download this record
