ABOUT THIS RECORDspecies: Phaseolus vulgaris
source: microPC, original name: miR1533
Taxonomy by NCBI:
Phaseolus vulgaris Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATAATAATAATAATAAT miRNA* TCTTTTTATTATTA mismatches: 3 bulges: 0 |
pre-miRNA
ATAATAATAATAATAATTGTTGAAATTTGATAGTTTTGGCTCATGAATCCAGCTGCTATCTATTCATTTATTCTTTTTATTATTA
dot-bracket secondary structure
.(((((((((.((.(((...((((....((((((.((((.........))))..))))))..))))...))).)).)))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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ATAATAATAATAATAATTGTTGAAATTTGATAGTTTTGGCTCATGAATCCAGCTGCTATCTATTCATTTATTCTTTTTATTATTA
dot-bracket secondary structure
.(((((((((.((.(((...((((....((((((.((((.........))))..))))))..))))...))).)).)))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
