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ABOUT THIS RECORD
ID:
MNEST046255
species:
Pinus taeda
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Pinus taeda
Pinus
Pinus
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGAAGATAGAGAGCACA
miRNA*
TGGTCTCCATGATTCTG
mismatches:
3
bulges:
1
View larger
pre-miRNA
CAGAAGATAGAGAGCACA
TCCGCTCACATGCCGGGACTCTGCGTTTGAGGTGTATG
TGGTCTCCATGATTCTG
dot-bracket secondary structure
(((((.((.((((.((((
(.((((((.((((.((....)))))).))).))).)))
)).)))).))..)))))
SIMILARITIES
miRBase
pta-MIR156a
:
5e-36
PMRD
pta-miR156a
:
5e-36
microPC
miR157
:
5e-36
UniProt
no hits
RFAM
no hits
Identical with:
pta-miR156a
from PMRD (
MNEST051551
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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