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ABOUT THIS RECORD
ID:
MNEST046297
species:
Gossypium hirsutum
source:
microPC, original name:
miR472
Taxonomy by NCBI:
Gossypium hirsutum
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTCCTACTCCTCCCATACC
miRNA*
AGTGGGATGGGTGGAAAGA
mismatches:
4
bulges:
1
View larger
pre-miRNA
GGA
AGTGGGATGGGTGGAAAGA
TTTGTATTTTCTCTCTTGAGTTTCTAAGAATGTAAAGCAAATC
TTTCCTACTCCTCCCATACC
dot-bracket secondary structure
...
.((((((.(((((((((((
(((((.(((.(..(((((......)))))..).))))))))))
))))).)))).))))))...
SIMILARITIES
miRBase
ghr-MIR482a
:
4e-43
PMRD
ghr-miR482a
:
4e-43
microPC
miR482
:
6e-39
UniProt
no hits
RFAM
no hits
Identical with:
miR482
from microPC (
MNEST045290
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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