ABOUT THIS RECORDspecies: Euphorbia esula
source: microPC, original name: miR408
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCACTGCCTCTTCCCTGGC miRNA* TGGGAACAGGCAGAGCATG mismatches: 2 bulges: 1 |
pre-miRNA
GCTGGGAACAGGCAGAGCATGGATGCAGCTATTAACAGAAACTCTCTGTTTTGGCTTCACTCATGCACTGCCTCTTCCCTGGC
dot-bracket secondary structure
((((((((.((((((.(((((..((.(((((..((((((.....)))))).))))).))..))))).)))))).))))).)))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
GCTGGGAACAGGCAGAGCATGGATGCAGCTATTAACAGAAACTCTCTGTTTTGGCTTCACTCATGCACTGCCTCTTCCCTGGC
dot-bracket secondary structure
((((((((.((((((.(((((..((.(((((..((((((.....)))))).))))).))..))))).)))))).))))).)))
SIMILARITIES| miRBase ptc-MIR408: 3e-16 PMRD ptc-miR408: 3e-16 microPC miR408: 6e-42 | UniProt no hits RFAM MIR408: 0.000000000000005 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
