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ABOUT THIS RECORD
ID:
MNEST046330
species:
Ipomoea nil
source:
microPC, original name:
miR169
Taxonomy by NCBI:
Ipomoea nil
Ipomoea
Ipomoeeae
Convolvulaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGCCAAGGATGACTTGCCG
miRNA*
GCGAGTTGTCCTTGGCT
mismatches:
3
bulges:
0
View larger
pre-miRNA
CAGCCAAGGATGACTTGCCG
GCCGGTGAACTCTTCCTCCTATTGCGGCGGACCCAACCATATATCCACCGCTCCGTACACTCTCAGGGTGACGAAAAGTT
TGTAAGTTG
GCGAGTTGTCCTTGGCT
dot-bracket secondary structure
.(((((((((..((((((((
((..(..((((............((((.(((............))).))))..(((.((((.....)))))))...))))
..)..))))
))))))..)))))))))
SIMILARITIES
miRBase
osa-MIR169p
:
0.0000004
PMRD
osa-miRf11416-akr
:
0.0000004
microPC
miR169
:
8e-67
UniProt
no hits
RFAM
MIR169_2: 0.000007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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