ABOUT THIS RECORDspecies: Euphorbia esula
source: microPC, original name: miR166
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGACCAGGCTTCATTCCC miRNA* GAATGTTGTCTGGCTCGAG mismatches: 4 bulges: 0 |
pre-miRNA
GGGAATGTTGTCTGGCTCGAGGACTCTACGCCGTTAGATCTGTGTATATATTGAATCTAATCTACCATCGTTAGGGTCGTCGGACCAGGCTTCATTCCC
dot-bracket secondary structure
(((((((..((((((..(((.(((((((((..(.(((((..(..((.....))...)..))))).)..)).))))))).)))..))))))..)))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGGAATGTTGTCTGGCTCGAGGACTCTACGCCGTTAGATCTGTGTATATATTGAATCTAATCTACCATCGTTAGGGTCGTCGGACCAGGCTTCATTCCC
dot-bracket secondary structure
(((((((..((((((..(((.(((((((((..(.(((((..(..((.....))...)..))))).)..)).))))))).)))..))))))..)))))))
SIMILARITIES| miRBase ptc-MIR166c: 0.0000000003 PMRD ptc-miRf10467-akr: 0.0000000003 microPC miR166: 2e-51 | UniProt no hits RFAM mir-166: 0.000000006 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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