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ABOUT THIS RECORD

ID: MNEST046337
species: Gossypium hirsutum
source: microPC, original name: miR166

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGGACCAGGCTTCATTCCC

miRNA*
GAATGTTGTCTGGACCGGG

mismatches: 3
bulges: 0

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pre-miRNA
GGGAATGTTGTCTGGACCGGGGACACTTGTGTTTCTAATCCGTTTTCCCTGCAATATTGTTCTGATTAACGTGGGGATCTTTATATTGCTTATTTTTGTA
ATGGATTAAGGTTGTACTAGTGTCGTCGGACCAGGCTTCATTCCC


dot-bracket secondary structure
(((((((..((((((.((((.((((((.(((.(..(((((((((......(((((((.(((((.((....)).)))))....)))))))..........)
))))))))..)...))).)))))).)))).))))))..)))))))



SIMILARITIES
miRBase ghr-MIR166b: 1e-78

PMRD ghr-miR166b: 1e-78

microPC miR166: 0.000000002
UniProt no hits

RFAM mir-166: 0.0000001

Identical with: ghr-MIR166b from miRBase (MNEST041048)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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