ABOUT THIS RECORDspecies: Glycine max
source: microPC, original name: miR166
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGACCAGGCTTCATTCCC miRNA* GAATGTTGGCTGGCTCGAG mismatches: 5 bulges: 0 |
pre-miRNA
GGGAATGTTGGCTGGCTCGAGGCTTTTCAAAGAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCATTCCC
dot-bracket secondary structure
(((((((..(.((((..(((((((((..........((((((........))))))..)))))))))..)))).)..)))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGGAATGTTGGCTGGCTCGAGGCTTTTCAAAGAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCATTCCC
dot-bracket secondary structure
(((((((..(.((((..(((((((((..........((((((........))))))..)))))))))..)))).)..)))))))
SIMILARITIES| miRBase mtr-MIR166e: 0.000000000004 PMRD gma-miR166o: 2e-42 microPC miR166: 2e-42 | UniProt no hits RFAM mir-166: 0.000000000005 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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