ABOUT THIS RECORDspecies: Euphorbia esula
miRNA family: MIR408
source: microPC, original name: miR408
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCACTGCCTCTTCCCTGGCT miRNA* CTGGGAACAGGCAGAGCATG mismatches: 2 bulges: 1 |
pre-miRNA
GGCTGGGAACAGGCAGAGCATGGATGCAGCTATTAACAGAAACTCTCTGTTTTGGCTTCACTCATGCACTGCCTCTTCCCTGGCT
dot-bracket secondary structure
(((((((((.((((((.(((((..((.(((((..((((((.....)))))).))))).))..))))).)))))).))))).))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGCTGGGAACAGGCAGAGCATGGATGCAGCTATTAACAGAAACTCTCTGTTTTGGCTTCACTCATGCACTGCCTCTTCCCTGGCT
dot-bracket secondary structure
(((((((((.((((((.(((((..((.(((((..((((((.....)))))).))))).))..))))).)))))).))))).))))
SIMILARITIES| miRBase ptc-MIR408: 7e-17 PMRD ptc-miR408: 7e-17 microPC miR408: 6e-42 | UniProt no hits RFAM MIR408: 0.000000000000001 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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