ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: MIR157
source: microPC, original name: miR157
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGACAGAAGAGAGAGAGCAC miRNA* GCTCTCTACTCTTCTGTCA mismatches: 1 bulges: 1 |
pre-miRNA
TTGACAGAAGAGAGAGAGCACAACCCGAGAAATGGTCAAAGAATCTTTTACCTTTGTTGGGAGTGTGCTCTCTACTCTTCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((((.(((((.(((.(((.((((...)))).)))))).)))))..)))))))))).)))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TTGACAGAAGAGAGAGAGCACAACCCGAGAAATGGTCAAAGAATCTTTTACCTTTGTTGGGAGTGTGCTCTCTACTCTTCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((((.(((((.(((.(((.((((...)))).)))))).)))))..)))))))))).)))))))))))
SIMILARITIES| miRBase ahy-MIR156c: 4e-43 PMRD ahy-miR157k: 4e-43 microPC miR156: 2e-42 | UniProt no hits RFAM mir-156: 0.0000000000003 |
Identical with: miR156 from microPC (MNEST046790) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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