ABOUT THIS RECORDspecies: Populus alba x Populus tremula
source: microPC, original name: miR393
SEQUENCE & STRUCTURE| miRNA TCCAAAGGGATCGCATTGATCT miRNA* ATCATGCGATCCCTTAGGA mismatches: 1 bulges: 1 |
pre-miRNA
TCCAAAGGGATCGCATTGATCTAATGACTTTCGATGTCTATATGATGTTAATGTTTAGTCATTTCATTGGATCATGCGATCCCTTAGGA
dot-bracket secondary structure
(((.((((((((((((.((((((((((.....((((.(((.((.........)).))).)))))))))))))))))))))))))).)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TCCAAAGGGATCGCATTGATCTAATGACTTTCGATGTCTATATGATGTTAATGTTTAGTCATTTCATTGGATCATGCGATCCCTTAGGA
dot-bracket secondary structure
(((.((((((((((((.((((((((((.....((((.(((.((.........)).))).)))))))))))))))))))))))))).)))
SIMILARITIES| miRBase ptc-MIR393d: 4e-43 PMRD ptc-miR393d: 4e-43 microPC miR393: 2e-45 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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