miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST046430
species: Brassica rapa
miRNA family: MIR156
source: microPC, original name: miR156

Taxonomy by NCBI:
Brassica rapa Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGACAGAAGAGAGTGAGCAC

miRNA*
GCTCACTGCTCTTTCTGTCA

mismatches: 1
bulges: 2

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pre-miRNA
TGACAGAAGAGAGTGAGCACACAAAAGTAAATTGCATATGTTGCATTTGCTTCTCTTGCGTGCTCACTGCTCTTTCTGTCA

dot-bracket secondary structure
.(((((((((((((((((((.(((((((((((.(((.....)))))))))))...))).))))))))).))).))))))).

UniProt no hits

RFAM mir-156: 2e-23

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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