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ABOUT THIS RECORD

ID: MNEST046433
species: Saccharum officinarum
miRNA family: MIR1439
source: microPC, original name: miR1439

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGGAACGGAGGGAGTAT

miRNA*
 ACTCCCTCTGTTCTAGTCAT

mismatches: 5
bulges: 0
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pre-miRNA
 TACTCCCTCTGTTCTAGTCATTCTGGCTTTTCTACATACATGGTTCTTATACTATGTTACTATGTATCTGGACATAGCGTATATCTAGGTGCTTAGCAAG
TCTATGTACTTAGAAAAACCAAAACGACTTACATTTTGGAACGGAGGGAGTAT

dot-bracket secondary structure
(((((((((((((((((((.((.(((.(((((((..(((((((.......(((.(((((....(((((((((.(((...))).))))))))).)))))))
))))))))..))))))).))).)).))))........))))))))))))))).


SIMILARITIES
miRBase tae-MIR1137: 0.0001

PMRD tae-miR1137: 0.0001

microPC miR1436: 0.000008		UniProt no hits

RFAM MIR1122: 0.0000000000006

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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