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ABOUT THIS RECORD

ID: MNEST046442
species: Helianthus exilis
source: microPC, original name: miR171

Taxonomy by NCBI:
Helianthus exilis Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGAGCCGTGCCAATATCA

miRNA*
 ATGTTGGTTCGGTTCAATA

mismatches: 2
bulges: 0
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pre-miRNA
 GATGTTGGTTCGGTTCAATAAGAACTCAATGTTCAAATAGTGCATTGAACGTTGCTTTTTGATTGAGCCGTGCCAATATCA

dot-bracket secondary structure
(((((((((.(((((((((.((((..((((((((((........))))))))))..)))).))))))))).))))))))).


SIMILARITIES
miRBase rco-MIR171a: 0.000000001

PMRD vvi-miR171c: 0.00000006

microPC miR171: 9e-41		UniProt no hits

RFAM MIR171_1: 0.00000002

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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