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ABOUT THIS RECORD
ID:
MNEST046445
species:
Citrus sinensis
miRNA family:
MIR164
source:
microPC, original name:
miR164
Taxonomy by NCBI:
Citrus sinensis
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGAGAAGCAGGGCACGTGCA
miRNA*
CATGTGCCCTTCTTCCCCA
mismatches:
5
bulges:
0
View larger
pre-miRNA
TGGAGAAGCAGGGCACGTGCA
TTACTAACTCAACCGCACATACATCTACTAACAAAAATTAATTAATCCACACATTTTGAAGAAACCAAATCAAGAAGCA
GCAAGCTCTTTCTGTTGTTATAGCTCAGTCATGAGTTGAGTTATTTCTT
CATGTGCCCTTCTTCCCCA
dot-bracket secondary structure
.((.((((.((((((((((..
....(((((((((...........(((.((((((....................((((.......))))...(((((.(
(....)).))))).)))))))))...........)))))))))......
)))))))))).)))).)).
SIMILARITIES
miRBase
csi-MIR164
:
2e-92
PMRD
csi-miR164
:
2e-92
microPC
miR164
:
2e-92
UniProt
no hits
RFAM
MIR164: 0.0000000007
Identical with:
csi-MIR164
from miRBase (
MNEST041221
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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