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ABOUT THIS RECORD
ID:
MNEST046448
species:
Populus x canadensis
source:
microPC, original name:
miR1444
Taxonomy by NCBI:
Populus x canadensis
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTCATATTCGGTCAACGTTC
miRNA*
ATATTGATCGAATATGTATG
mismatches:
3
bulges:
0
View larger
pre-miRNA
GA
ATATTGATCGAATATGTATG
AAATATGATGGTTATATGTTTCA
TTCATATTCGGTCAACGTTC
dot-bracket secondary structure
((
(..(((((((((((((.(((
(((((((.......)))))))))
).)))))))))))))..)))
SIMILARITIES
miRBase
ptc-MIR1444b
:
6e-29
PMRD
ptc-miR1444b
:
6e-29
microPC
miR1444
:
6e-29
UniProt
no hits
RFAM
MIR1444: 1e-27
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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