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ABOUT THIS RECORD
ID:
MNEST046466
species:
Brassica napus
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GACAGAAGAGAGTGAGCAC
miRNA*
GCTCACTCTCTCTATGTC
mismatches:
2
bulges:
1
View larger
pre-miRNA
GACAGAAGAGAGTGAGCAC
ACAAAGGGGGAATTGTATAAAATTAAGTTTGTTGTATATAGTTGCTTTTGCGT
GCTCACTCTCTCTATGTC
dot-bracket secondary structure
((((..(((((((((((((
.((((((...(((((((((.(((.......))).))))))))).)))))).))
)))))))))))...))))
SIMILARITIES
miRBase
ath-MIR156d
:
5e-18
PMRD
ath-miRf10567-akr
:
5e-18
microPC
miR156
:
4e-46
UniProt
no hits
RFAM
mir-156: 9e-17
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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