ABOUT THIS RECORDspecies: Cucumis melo subsp. melo
source: microPC, original name: miR166
Taxonomy by NCBI:
Cucumis melo subsp. melo Cucumis melo Cucumis Cucurbitaceae Cucurbitales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGACCAGGCTTCATTCCC miRNA* GAATGTTGTCTGGCTCGAG mismatches: 4 bulges: 0 |
pre-miRNA
GGGAATGTTGTCTGGCTCGAGGACACTTTTATTCGATCTTTTGATTTTTGTGTTTATATTTAGTGTCGTCGGACCAGGCTTCATTCCC
dot-bracket secondary structure
(((((((..((((((..(((.((((((..(((..((((....)))).........)))...)))))).)))..))))))..)))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGGAATGTTGTCTGGCTCGAGGACACTTTTATTCGATCTTTTGATTTTTGTGTTTATATTTAGTGTCGTCGGACCAGGCTTCATTCCC
dot-bracket secondary structure
(((((((..((((((..(((.((((((..(((..((((....)))).........)))...)))))).)))..))))))..)))))))
SIMILARITIES| miRBase ath-MIR166b: 0.0000000003 PMRD ath-miR166b: 0.0000000003 microPC miR166: 0.0000000003 | UniProt no hits RFAM mir-166: 0.000000005 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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