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ABOUT THIS RECORD
ID:
MNEST046496
species:
Populus nigra
miRNA family:
MIR393
source:
microPC, original name:
miR393
Taxonomy by NCBI:
Populus nigra
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCAAAGGGATCGCATTGATC
miRNA*
TCATGCGATCCCTTAGGA
mismatches:
1
bulges:
1
View larger
pre-miRNA
TCCAAAGGGATCGCATTGATC
TAATGACTCTCGATGTCTAAATCATATTAATGTTTAGTCTTTTCGTTGGA
TCATGCGATCCCTTAGGA
dot-bracket secondary structure
(((.((((((((((((.((((
((((((.....((.(.(((((.(((....)))))))).).))))))))))
)))))))))))))).)))
SIMILARITIES
miRBase
ptc-MIR393c
:
4e-43
PMRD
ptc-miR393c
:
4e-43
microPC
miR393
:
2e-45
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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