miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST046499
species: Gossypium hirsutum
source: microPC, original name: miR398

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGTGTTCTCAGGTCACCCCTT

miRNA*
GGGGTGCCACCTAAGAACACAGG

mismatches: 1
bulges: 2

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pre-miRNA
GAGGGGTGCCACCTAAGAACACAGGTCATCCCTTAACCAAATAGCTTGTGTTCTCAGGTCACCCCTT

dot-bracket secondary structure
((((((((..((((.((((((((((..((...........))..)))))))))).))))))))))))

UniProt no hits

RFAM MIR398: 0.00005

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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