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ABOUT THIS RECORD
ID:
MNEST046531
species:
Vigna unguiculata
source:
microPC, original name:
miR160
Taxonomy by NCBI:
Vigna unguiculata
Vigna
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCC
miRNA*
CGTGCGAGGAGTCATGCA
mismatches:
3
bulges:
0
View larger
pre-miRNA
TGCCTGGCTCCCTGTATGCC
ATTTGCAGAGCCCATCAGAACAGTGATGGCTTTAACTAATGG
CGTGCGAGGAGTCATGCA
dot-bracket secondary structure
.((.(((((((.((((((((
(((...((((((.((((......))))))))))....)))))
)))))).))))))).)).
SIMILARITIES
miRBase
vvi-MIR160e
:
0.000000000001
PMRD
vvi-miR160f
:
0.000000000001
microPC
miR160
:
4e-40
UniProt
no hits
RFAM
mir-160: 0.00000000002
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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