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ABOUT THIS RECORD

ID: MNEST046534
species: Ricinus communis
source: microPC, original name: miR159

Taxonomy by NCBI:
Ricinus communis Ricinus Acalypheae Acalyphoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGGGAGCTCTA

miRNA*
GAGCTCCTTGAAGTCCAATA

mismatches: 2
bulges: 0

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pre-miRNA
TGGAGCTCCTTGAAGTCCAATAGAGGATCTTGATGGGTAGATTGAGCTGCTGAGCTATGGATCCCACAGCCCTATAAGCAGAGATTATAATTTTGGATAG
GCTTGTGGCTTGCATATCTCAGGAGCTTCATTACCTTGTATTAGATCCTTGTTTGGATTGAAGGGAGCTCTA


dot-bracket secondary structure
(((((((((((..(((((((..((((((((....((((((...(((((.(((((.((((.(..((((((.(((((...(((((.......))))).))))
).))))))..).)))).))))).)))))..))))))......))))))))..)))))))..)))))))))))



SIMILARITIES
miRBase rco-MIR159: 1e-94

PMRD ptc-miR159b: 3e-30

microPC miR159: 1e-94
UniProt no hits

RFAM MIR159: 2e-93

Identical with: miR319 from microPC (MNEST044913)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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