ABOUT THIS RECORDspecies: Citrus clementina
source: microPC, original name: miR482
Taxonomy by NCBI:
Citrus clementina Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTCCCTACTCCACCCAT miRNA* GGGTGAGTAGGGAAGATA mismatches: 0 bulges: 1 |
pre-miRNA
ATGGGTGAGTAGGGAAGATAATTTAACTAAGTAATAATAATATCACTTTTTTCATTATTACTATTTACTTAAGGAATTTGTATATCTTCCCTACTCCACC
CAT
dot-bracket secondary structure
((((((((((((((((((((((((...(((((((((.(((((.............))))).)).)))))))..)))).....))))))))))))).))))
)))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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ATGGGTGAGTAGGGAAGATAATTTAACTAAGTAATAATAATATCACTTTTTTCATTATTACTATTTACTTAAGGAATTTGTATATCTTCCCTACTCCACC
CAT
dot-bracket secondary structure
((((((((((((((((((((((((...(((((((((.(((((.............))))).)).)))))))..)))).....))))))))))))).))))
)))
SIMILARITIES| miRBase no hits PMRD no hits microPC miR482: 8e-42 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
