ABOUT THIS RECORDspecies: Euphorbia esula
source: microPC, original name: miR156
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGAAGATAGAGAGCACA miRNA* TGCTCTCTATGCTTCTG mismatches: 0 bulges: 1 |
pre-miRNA
CAGAAGATAGAGAGCACAGATGATGATTTTGGAGTTGAAATTAATCAAATTCACTCCTTTGTGCTCTCTATGCTTCTG
dot-bracket secondary structure
((((((((((((((((((((.(((((.((((..((((....)))))))).))).)).)))))))))))))).))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CAGAAGATAGAGAGCACAGATGATGATTTTGGAGTTGAAATTAATCAAATTCACTCCTTTGTGCTCTCTATGCTTCTG
dot-bracket secondary structure
((((((((((((((((((((.(((((.((((..((((....)))))))).))).)).)))))))))))))).))))))
SIMILARITIES| miRBase ptc-MIR156i: 0.000000004 PMRD ptc-miR156i: 0.000000004 microPC miR157: 5e-39 | UniProt no hits RFAM no hits |
Identical with: miR157 from microPC (MNEST046718) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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