ABOUT THIS RECORDspecies: Centaurea maculosa
source: microPC, original name: miR399
Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCCAAACAAGAATTGCCC miRNA* GTCTTTGTCTTGGTTAAG mismatches: 1 bulges: 5 |
pre-miRNA
GGGTCTTTGTCTTGGTTAAGAGGTTCCATATTTTTTGCCAAACAAGAATTGCCC
dot-bracket secondary structure
((((.(((((.(((((.(((((((.....)))))))))))))))))....))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGGTCTTTGTCTTGGTTAAGAGGTTCCATATTTTTTGCCAAACAAGAATTGCCC
dot-bracket secondary structure
((((.(((((.(((((.(((((((.....)))))))))))))))))....))))
SIMILARITIES| miRBase no hits PMRD no hits microPC miR399: 7e-25 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
